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ABySS

Assembler

 

ABySS is a de novo, parallel, paired-end sequence assembler that is designed for short reads. The single-processor version is useful for assembling genomes up to 100 Mbases in size. The parallel version is implemented using MPI and is capable of assembling larger genomes. We propose MPI version using 4 cores on the platform.

Author(s)

Simpson JT, Wong K, Jackman SD, Schein JE, Jones SJ


Version

1.2.1


Subsections

Assembler


Tags

parallel - De novo


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