Phylogenomics
Phylogenomics is the intersection between genomics and phylogeny, i.e.,
the study of genome evolution through phylogenetic methods.
Major developments in MBB:
- Orthomam : a database of one-to-one orthologous genes in mammals for phylogenetic and evolutionary genomic purposes
- Bio++ : an open source C++ library providing facilities for C++ programming in molecular evolution and phylogeny
- Physicist, SuperTriplet: programs for super-tree reconstruction out of a forest of source trees
- CoMap: a program for detecting coevolving positions in a sequence alignment
- MACSE : a program for aligning coding sequences with frame shifts
- Training: Fred Delsuc's course on phylogenetic methods (in french), ...
Other tools:
Contact:
F. Delsuc, E. Douzery, J. Dutheil, V. Ranwez, K . Belkhir
Contributors:
ISEM : Khalid Belkhir, Nicolas Galtier, Rémy Dernat, Julien Veyssier ( and previously Sébastien Harispe, Guillaume Dugas )
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MBB platform Version 0.1