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Databases

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Arbre de la vie

 

L’arbre de la vie est un projet de l'Université Montpellier II.
Il a pour but de mettre à disposition des étudiants et des enseignants les connaissances actuelles sur la diversité du vivant. Le site propose de naviguer entre les grands groupes taxonomiques grâce à des arbres cliquable. Pour accéder aux informations disponible pour un taxon, cliquez sur son nom dans l’arbre. Pour naviguer entre les arbres cliquez sur les flèches : une flèche à la racine de l’arbre permet de remonter vers l’arbre parent ; une flèche à droite d’un nom de taxon permet d’afficher l’arbre dont ce taxon est l’ancêtre commun. Toutes les informations présentées dans ce site peuvent être librement exploitées.

Tags

Apps


OrthoMaM

 

Molecular data play a key role in phylogenetic inference. Mammalian systematics provides us with a clear example, with several previously open evolutionary questions now able to be answered. However, molecular studies have until present used only a handful of classic markers and have not attempted to utilise the information contained within the increasingly large pool of mammalian genome sequences. The identification and utilisation of potentially new informative markers from this pool can help to further resolve the mammalian phylogenetic tree.

Tags

Mammalian - ISEM


Pollen Database

 

Pollen Database : Slides Collection provided by ISEM Department : "Palaeoenvironments & Palaeoclimates"

Polymorphix

 

Polymorphix is a database of intraspecific sequence polymorphism, structured under the ACNUC sequence database management system. It allows one to select sets of within-(eukaryotic)species sequences families, and to visualize multiple alignments and phylogenetic trees. Polymorphix is useful for meta-analyses of population genomics, and as a bibliographic tool in population genetics. Families in Polymorphix are groups of sequences sharing at least 80% similarity. Multiple alignments were made with Mabios. Outgroup have been added when available (78% similarity required), and aligned to the within-species profile with Clustalv-1.81. Sequence alignments and Neighbour-Joining phylogenetic trees can be viewed. You can use them, together with sequence annotations and bibliographic links, to decide wether the selected families are relevant for your study




Datasets

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Population size does not influence mitochondrial genetic diversity in animals

Metazoa data set Population size does not influence mitochondrial genetic diversity in animals. Science 28 April 2006: Vol. 312. no. 5773, pp. 570 - 572 DOI: 10.1126/science.1122033.

Author(s)

Bazin E., Glémin S. and Galtier N.


Journal

Science




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Ribosomal DNA in vertebrates, angiosperms and other eukaryotes

GC-biased gene conversion impacts ribosomal DNA evolution in vertebrates, angiosperms and other eukaryotes.

Author(s)

Juan S. Escobar, Sylvain Glémin, Nicolas Galtier.


Journal

Molecular biology and evolution


Tags

ISEM




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The Longevity Hypothesis

Strong Variations of Mitochondrial Mutation Rate across Mammals – The Longevity Hypothesis

Author(s)

Benoit Nabholz, Sylvain Glémin, Nicolas Galtier


Journal

Molecular biology and evolution


Tags

Jobim 2010




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Wolbachia complete genome

Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome gi|190570478|ref|NC_010981.1|

Author(s)

ISEM


Journal


Tags

ISEM




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